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244937

MOLECULAR IDENTIFICATION OF VIRULENCE GENES OF PATHOGENIC ESCHERICHIA COLI ISOLATED FROM BROILERS CHICKEN

Article

Last updated: 23 Jan 2023

Subjects

-

Tags

Avian / Rabbit diseases
Laboratory investigation
Microbiology, mycology and immunology

Abstract

This study was implemented to isolate, characterize the presence of E coli and study their antibiotic resistance and virulence genes in broiler chickens in Assiut city. A total of 120 samples (liver, heart, yolk sac and lung) were gained from 3 to 35 days old clinically and freshly dead broiler suffering from respiratory manifestation (CRD), omphalitis, septicemia and diarrhea in Assiut Governorates for the detection of pathogenic E coli. Isolation and phenotypic identification of the isolates were performed. Serology and detection of antibiotic sensitivity and resistance were done. Also, detection of genes accountable for virulence (ompA and iroN genes) and antimicrobial resistance were all performed on the samples. Also, resistance genes to antimicrobials (blaTEM, blaVIM and qnrA genes) were detected. E coli was detected and recognized in 31.7 % of the cases. According to the data, 11 of the 38 E coli isolates were identified using serology. The conventional disc diffusion method was used to assess the susceptibility and resistance of the isolated E coli to various antibacterial agents. A total of 81.5 % of isolates have a MAR index exceeding 0.2, whereas 18.5 % have a MAR index not more than 0.2. with an average MDR index of 0.485. Antimicrobial resistance genes were detected in 73.7 % of 19 serologically recognized virulence and antibiotic resistance genes in E. coli isolates such as ompA gene detected in 95%, blaTEM gene detected in 95 %, blaVIM gene detected in 73.7 %, and qnrA gene detected in 31.5 %, but the iroN gene was not detected.

DOI

10.21608/avmj.2022.132991.1054

Keywords

Escherichia coli, Virulence genes, antibiotic-resistance genes, PCR

Authors

First Name

HOSSAM

Last Name

ABD EL AZIZ

MiddleName

A.

Affiliation

Poultry Diseases Department, Animal Health Research Institute, Agriculture Research Center, Egypt

Email

mariamhossam912@yahoo.com

City

Minia

Orcid

-

First Name

MOSTAFA

Last Name

SHEHATA

MiddleName

A.

Affiliation

Poultry Diseases Department, Faculty of Veterinary Medicine, Assiut University, 71526, Egypt

Email

shata.mostafa194854@yahoo.com

City

-

Orcid

-

First Name

NAGLAA

Last Name

HAGAG

MiddleName

M.

Affiliation

Head of the genome research unit, NLQP, Animal health research institute, Agriculture Research Center, Egypt

Email

naglaahagagahri@gmail.com

City

Cairo

Orcid

-

First Name

NAGLAA

Last Name

ALI

MiddleName

M.

Affiliation

Poultry Diseases Department, Animal Health Research Institute, Agriculture Research Center, Egypt

Email

naglaamahmoud69@yahoo.com

City

-

Orcid

0000-0001-8481-2687

First Name

OMAR

Last Name

AMEN

MiddleName

-

Affiliation

Poultry Diseases Department, Faculty of Veterinary Medicine, Assiut University, 71526, Egypt

Email

omarkamel83@yahoo.com

City

-

Orcid

-

Volume

68

Article Issue

174

Related Issue

35508

Issue Date

2022-07-01

Receive Date

2022-05-14

Publish Date

2022-07-01

Page Start

17

Page End

27

Print ISSN

1012-5973

Online ISSN

2314-5226

Link

https://avmj.journals.ekb.eg/article_244937.html

Detail API

https://avmj.journals.ekb.eg/service?article_code=244937

Order

3

Type

Research article

Type Code

1,840

Publication Type

Journal

Publication Title

Assiut Veterinary Medical Journal

Publication Link

https://avmj.journals.ekb.eg/

MainTitle

-

Details

Type

Article

Created At

23 Jan 2023