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385515

Bioinformatics Study of the Microarray Data Set of Ovarian Carcinoma in Cattle

Article

Last updated: 03 Jan 2025

Subjects

-

Tags

Animal Health, Nutrition and Food Control (Veterinary Public Health, Animal Wealth Development, Animal Nutrition, Zoonoses, Food Control)

Abstract

Ovarian tumor is one of the gynecological tumors that have a poor prognosis, especially in domestic animals. Animals frequently develop ovarian tumors, and most of these cases affect cows. It is considered the most common malignant gynecologic tumor with complex etiology. The scientific community has recently been able to conduct research on prognostic markers, prospective therapeutic targets, and ways to improve treatment outcomes thanks to the amazing advancements in bioinformatics. In the current study we used some of bioinformatics tools as Gene Expression Omnibus (GEO) database, Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), Cytoscape and STRING to discover the hub genes associated with the prognosis of ovarian cancers. Through the gene expression profile (GSE225981) between tumor tissue and normal tissue we found that the top upregulated hub gene involved in ovarian cancer was ESR1 gene and top downregulated hub gene was ITGA2. Complement and coagulation cascades were the most implicated pathways in ovarian tumor. Study these genes will help in reaching to know the candidate gene that responsible for ovarian cancer so found targeted treatments and lower the death rate of affected animals.

DOI

10.21608/zvjz.2024.296573.1243

Keywords

Ovarian tumor, hub genes, Bioinformatics, Tumors, Geo

Authors

First Name

Iman

Last Name

ElAraby

MiddleName

E

Affiliation

Department of Genetics and Genetic Engineering, Faculty of Vet. Medicine, Zagazig University, Zagazig, Egypt

Email

omar3sherif@gmail.com

City

-

Orcid

-

First Name

Aymen

Last Name

Saleh

MiddleName

A

Affiliation

Department of Genetics and Genetic Engineering, Faculty of Vet. Medicine, Zagazig University, Zagazig, Egypt

Email

aasalleh@vet.zu.edu.eg

City

-

Orcid

-

First Name

Asmaa

Last Name

Zaghlol

MiddleName

W

Affiliation

Department of Genetics and Genetic Engineering, Faculty of Vet. Medicine, Zagazig University, Zagazig, Egypt

Email

awawad@vet.zu.edu.eg

City

-

Orcid

-

First Name

Noura

Last Name

Hussien

MiddleName

-

Affiliation

Department of Genetics and Genetic Engineering, Faculty of Vet. Medicine, Zagazig University, Zagazig, Egypt

Email

nourahussien124@gmail.com

City

zagazic

Orcid

-

Volume

52

Article Issue

3

Related Issue

50845

Issue Date

2024-09-01

Receive Date

2024-06-30

Publish Date

2024-09-01

Page Start

367

Page End

379

Print ISSN

1110-1458

Online ISSN

2357-075X

Link

https://zvjz.journals.ekb.eg/article_385515.html

Detail API

https://zvjz.journals.ekb.eg/service?article_code=385515

Order

385,515

Type

Original Article

Type Code

601

Publication Type

Journal

Publication Title

Zagazig Veterinary Journal

Publication Link

https://zvjz.journals.ekb.eg/

MainTitle

Bioinformatics Study of the Microarray Data Set of Ovarian Carcinoma in Cattle

Details

Type

Article

Created At

30 Dec 2024