228796

Phenotypic and molecular detection of carbapenemase producing <i>Escherichia coli</i> and <i>Klebsiella pneumoniae</i>

Article

Last updated: 04 Jan 2025

Subjects

-

Tags

Antimicrobial resistance

Abstract

Background:Detection of carbapenemases properly and rapidly is vital in the fight against the emergence and spread of carbapenem resistant bacteria. This study was carried out to phenotypically and molecularly detect carbapenemase producing Escherichia coli (E. coli) and Klebsiella   pneumoniae (K. pneumoniae ). Methods: A total of 123 isolates consisting 70isolates of E. coli and 53 isolates of K. pneumoniae were screened for carbapenem resistant isolates (CRIs). The CRIs were then screened phenotypically for carbapenemase production using the Modified Hodge Test (MHT), Carba NP test and modified Carbapenem Inactivation Method (mCIM). The CRIs were also screened molecularly for carbapenemase genes by PCR and the carbapenemase genes detected were sequenced. Results: Out of the 123 isolates screened for carbapenem resistance, 6 (4.88%) comprising of 2 isolates of E. coli (2/70; 2.86%) and 4 isolates of K. pneumoniae (4/53; 7.55%) were carbapenem resistant isolates. Phenotypically, all the 6 CRIs (100.00%) were positive for carbapenemase by mCIM. However, 5 (83.33%) were positive by CarbaNP and 4 (66.66%) were positive by MHT. Carbapenemase genes were detected in five out of the six carbapenem resistant isolates screened. The most frequently detected carbapenemase gene was blaOXA gene (57.14%) followed by blaNDM gene (42.86). blaKPC gene was not detected (0.00%). The detection rates of OXA and NDM carbapenemases were found be to 100.0% by Carba NP test and mCIM while the rates of OXA and NDM carbapenemases by MHT were found to be 75.0% and 33.33% respectively. Conclusion: Carbapenemase producing K. pneumoniae and E. coli were detected both phenotypically and molecularly. The carbapenem resistant determinants were blaOXA and blaNDM gene.

DOI

10.21608/mid.2022.124181.1251

Keywords

Phenotypic, Carbapenemase, K. pneumoniae, E. coli, resistance molecular

Authors

First Name

Ibrahim

Last Name

Hussaini

MiddleName

Mohammed

Affiliation

Department of Microbiology, Faculty of Life Sciences, Ahmadu Bello University, Zaria Nigeria

Email

hussainiibrahim269@gmail.com

City

-

Orcid

-

First Name

Ahmed

Last Name

Suleiman

MiddleName

Babangida

Affiliation

Department of Microbiology, Faculty of Life Sciences, Ahmadu Bello University, Zaria Nigeria

Email

sulybabs@gmail.com

City

Zaria

Orcid

-

First Name

Olayeni

Last Name

Olonitola

MiddleName

Stephen

Affiliation

Department of Microbiology, Faculty of Life Sciences, Ahmadu Bello University, Zaria Nigeria

Email

olonisteve@gmail.com

City

Zaria

Orcid

-

First Name

Rukayat

Last Name

Oyi

MiddleName

Avosuahi

Affiliation

Department of Pharmaceutics and Industrial Pharmacy, Faculty of Pharmaceutical Sciences, Ahmadu Bello University, Zaria

Email

pharmaroyi@yahoo.com

City

Zaria

Orcid

-

Volume

4

Article Issue

1

Related Issue

39092

Issue Date

2023-02-01

Receive Date

2022-02-26

Publish Date

2023-02-01

Page Start

151

Page End

159

Print ISSN

2682-4132

Online ISSN

2682-4140

Link

https://mid.journals.ekb.eg/article_228796.html

Detail API

https://mid.journals.ekb.eg/service?article_code=228796

Order

19

Type

Original Article

Type Code

1,157

Publication Type

Journal

Publication Title

Microbes and Infectious Diseases

Publication Link

https://mid.journals.ekb.eg/

MainTitle

Phenotypic and molecular detection of carbapenemase producing <i>Escherichia coli</i> and <i>Klebsiella pneumoniae</i>

Details

Type

Article

Created At

25 Dec 2024