Beta
392023

Molecular Detection and Phylogeny of The Bipartite Begomovirus Pepper golden mosaic virus Associated with Okra Leaf Curl Betasatellite in the Iresine herbstii Ornamental Plant in

Article

Last updated: 03 Jan 2025

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Abstract

Pepper golden mosaic virus (PepGMV), a whitefly-transmitted bipartite begomovirus, is one of the most important viruses infecting pepper plants in the Western Hemisphere, including the United States and Latin America. PepGMV was detected in Giza, Egypt and identified as (PepGMV-EG-GZ), infecting the ornament Iresine herbstii and inducing mosaic and leaf curl symptoms. PCR analysis of the virus genome confirmed its bipartite begomovirus nature and its association with the defective okra leaf curl betasatellite (OLCB), namely PepGMB (FJ436005). The GenBank Blastn analysis, phylogeny, and nucleotide pairwise sequence identity (PSI) showed the clustering of PepGMV-EG-GZ DNA-A (FJ416867) and DNA-B (FJ416868) with PepGMV-Mo-US:TX (AY928512) and PepGMV-D-US:TX (AY928514), respectively. PepGMV-EG-GZ DNA-A had 98.2% PSI with PepGMV-Mo-US:TX, suggesting it was a variant of PepGMV isolates. PepGMB clustered with several Egyptian defective betasatellites. PepGMB had a PSI of 96.4% with OLCB-squash (FJ455515), indicating that it was an isolate of OLCBs. PepGMB had PSIs of 61.1% and 65.9% with the intact OLCB and cotton leaf curl betasatellite (CLCuB) from Pakistan (AJ316029) and India (AJ316037), respectively, an indication of its different nature from these two satellites. On the other hand, the intact OLCB(s) from Egypt clustered with the intact OLCB and CLCuB from Pakistan and India, respectively, an indication of their origin in the Indian subcontinent and not in the Middle East. Nucleotide sequence analysis on PepGMB showed the presence of a satellite-conservative region stem-loop structure similar to the other betasatellites. The possible role of defective PepGMB in affecting symptom development in I. herbstii is discussed.

DOI

10.21608/eajbsc.2024.392023

Keywords

Pepper golden mosaic virus, Betasatellite DNA, Phylogeny

Authors

First Name

Aly

Last Name

Abdel-Salam

MiddleName

M.

Affiliation

Plant Pathology Department, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.

Email

ali.mamoun@agr.cu.edu.eg

City

-

Orcid

0000-0002-6762-4972

First Name

Malik

Last Name

Mujaddad-ur-Rehman

MiddleName

-

Affiliation

Department of Microbiology, Faculty of Health and Biomedical Sciences, Abbottabad University of Science and Technology, Pakistan.

Email

-

City

Pakistan

Orcid

-

First Name

Doaa

Last Name

Soliman

MiddleName

Z.

Affiliation

Plant Pathology Department, Faculty of Agriculture, Cairo University, Giza 12613, Egypt.

Email

-

City

Egypt

Orcid

-

Volume

16

Article Issue

2

Related Issue

48899

Issue Date

2024-12-01

Receive Date

2024-10-05

Publish Date

2024-11-20

Page Start

297

Page End

316

Print ISSN

2090-0767

Online ISSN

2090-083X

Link

https://eajbsc.journals.ekb.eg/article_392023.html

Detail API

https://eajbsc.journals.ekb.eg/service?article_code=392023

Order

392,023

Type

Original Article

Type Code

673

Publication Type

Journal

Publication Title

Egyptian Academic Journal of Biological Sciences. C, Physiology and Molecular Biology

Publication Link

https://eajbsc.journals.ekb.eg/

MainTitle

Molecular Detection and Phylogeny of The Bipartite Begomovirus Pepper golden mosaic virus Associated with Okra Leaf Curl Betasatellite in the Iresine herbstii Ornamental Plant in

Details

Type

Article

Created At

24 Dec 2024