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303396

A hybrid of Information gain and a Coati Optimization Algorithm for gene selection in microarray gene expression data classification.

Article

Last updated: 23 Dec 2024

Subjects

-

Tags

Artificial Intelligence

Abstract

Gene expression data has become an essential tool for cancer classification because it provides substantial insights into the underlying mechanisms of cancer progression. However, the high-dimensional nature of microarray gene expression data presents a significant challenge. This paper introduces a new method called IG-COA, which combines Information Gain (IG) approach and Coati Optimization Algorithm (COA), to identify the biomarkers genes. COA is a recent algorithm that has not been previously examined for feature or gene selection, to the best of our knowledge. Firstly, the IG method is used because using COA directly on microarray datasets is ineffective and can make it challenging to train a classifier accurately. Secondly, the COA algorithm is utilized to select the optimal subset of genes from the previously selected ones. The effectiveness of the suggested IG-COA method with a Support Vector Machine is tested on several microarray gene expression datasets, and it exceeds other state-of-the-art methods.

DOI

10.21608/kjis.2023.216661.1013

Keywords

Gene selection, Feature Selection, Microarray Gene Expression, Coati Optimization Algorithm, Cancer Classification

Authors

First Name

Sarah

Last Name

Osama

MiddleName

-

Affiliation

Computer Science Department, Faculty of Computers and Information, Minia University, Minia, Egypt

Email

sarahosama792@mu.edu.eg

City

Minia

Orcid

-

First Name

Abdelmgeid

Last Name

Ali

MiddleName

A.

Affiliation

Computer Science Department, Faculty of Computers and Information, Minia University, Minia, Egypt

Email

a.ali@minia.edu.eg

City

Minia

Orcid

-

First Name

Hassan

Last Name

Shaban

MiddleName

-

Affiliation

Computer Science Department, Faculty of Computers and Information, Minia University, Minia, Egypt

Email

hassanshaban@minia.edu.eg

City

Minia

Orcid

-

Volume

4

Article Issue

1

Related Issue

41824

Issue Date

2023-06-01

Receive Date

2023-06-10

Publish Date

2023-06-01

Page Start

1

Page End

16

Print ISSN

2537-0677

Online ISSN

2535-1478

Link

https://kjis.journals.ekb.eg/article_303396.html

Detail API

https://kjis.journals.ekb.eg/service?article_code=303396

Order

303,396

Type

Original Article

Type Code

462

Publication Type

Journal

Publication Title

Kafrelsheikh Journal of Information Sciences

Publication Link

https://kjis.journals.ekb.eg/

MainTitle

A hybrid of Information gain and a Coati Optimization Algorithm for gene selection in microarray gene expression data classification.

Details

Type

Article

Created At

23 Dec 2024