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227694

Detection and identification of a new isolate of Grapevine fanleaf Virus naturally infecting Grapevine plants in Egypt using qReal Time-PCR

Article

Last updated: 28 Dec 2024

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Abstract

Grapevine fanleaf virus (GFLV) is a member of the genus Nepovirus in the family Comoviridae, a widely distributed virus responsible for grapevine (Vitis vinifera) degeneration. This virus causes serious economic losses by reducing grape crop yield. The Quantitative Real-Time Reverse Transcription-Polymerase Chain Reaction (qReal Time-PCR) assay was carried out on (GFLV) recovered from infected grapevines leaves at Alexandria, Egypt. A 606 bp fragment of the GFLV RNA-2 coat protein (CP) gene was amplified and then sequenced. Results of reactions of diagnostic hosts were observed on Gomphrena globosa, which developed systemic mottling, leaves twisting and necrotic spots during spring, whereas Chenopodium amaranticolor induced systemic mottling and leaf deformation, and its sap seemed relatively insensitive to the inhibitors of infection. Mottling of Glycine max was detected after inoculation, but inoculation of Nicotiana glutinosa didn't induce any symptoms. This study aimed to detect and identify a new isolate of GFLV-DA3 from Egypt using biological and molecular tools. 

DOI

10.21608/nrmj.2019.66742

Keywords

Grapevine fanleaf virus, qReal-Time PCR, Coat protein, Sequencing, Mechanical transmission

Authors

First Name

Dalia

Last Name

Gamil Aseel

MiddleName

-

Affiliation

Plant Protection and Biomolecular Diagnosis Department, Arid Lands Cultivation Research Institute, City of Scientific Research and Technological Applications, New Borg EL-Arab city, Alexandria, Egypt

Email

daliagamil52@gmail.com

City

Alexandria

Orcid

-

First Name

Mahmoud

Last Name

Hamdy Abd El-Aziz

MiddleName

-

Affiliation

Plant Pathology Institute, Agricultural Research Center, Alexandria, Egypt

Email

-

City

-

Orcid

0000-0002-4604-4063

First Name

E. E.

Last Name

Hafez

MiddleName

-

Affiliation

Plant Protection and Biomolecular Diagnosis Department, Arid Lands Cultivation Research Institute, City of Scientific Research and Technological Applications, New Borg EL-Arab city, Alexandria, Egypt

Email

-

City

-

Orcid

-

Volume

3

Article Issue

6

Related Issue

32627

Issue Date

2019-12-01

Receive Date

2019-10-23

Publish Date

2019-12-01

Page Start

493

Page End

501

Print ISSN

2537-0286

Online ISSN

2537-0294

Link

https://nrmj.journals.ekb.eg/article_227694.html

Detail API

https://nrmj.journals.ekb.eg/service?article_code=227694

Order

227,694

Type

Original Article

Type Code

2,265

Publication Type

Journal

Publication Title

Novel Research in Microbiology Journal

Publication Link

https://nrmj.journals.ekb.eg/

MainTitle

Detection and identification of a new isolate of Grapevine fanleaf Virus naturally infecting Grapevine plants in Egypt using qReal Time-PCR

Details

Type

Article

Created At

23 Jan 2023