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92374

Biological and Molecular Variability of Rice Sheath Rot Pathogen Sarocladium oryzae using SCAR and SRAP Markers

Article

Last updated: 22 Jan 2023

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Abstract

Rice sheath rot disease caused by Sarocladium oryzae is a seed
borne disease and is a major production constraint in some rice
growing countries. This study aimed to evaluate some of our local rice
entries to sheath rot infection with different isolates, elucidate their
phytotoxicity effect and the molecular variability among some
selected isolates derived from different locations. Data revealed that
Sakha 101 was the most resistant cultivar against sheath rot. The
Toxin of S. oryzae completely inhibited differentiation of rice roots
and negatively affected seed germination of rice and weeds. S. oryzae
isolates showed morphological variability and polymorphism in DNA,
high levels of genetic variability among isolates were identified.
Using MR specific primers revealed that the two bands (1500 and
1400bp) were found only in low virulent isolates. Using SRAP
dendogram supported the similarity of data. Moreover, using SCAR
and SRAP primers could be able to differentiate among S. oryzae
isolates collected from different locations or varieties and differed in
their virulence and classified in two main clusters as high and low
virulent. Thus, the molecular variability of S. oryzae isolates may be
an important consideration in breeding programs to develop resistance
for sheath rot disease.

DOI

10.21608/ejp.2016.92374

Keywords

Breeding programs, molecular variability, rice entries, Sarocladium oryzae and sheath rot

Authors

First Name

Mona

Last Name

Saleh

MiddleName

M.

Affiliation

Plant Pathology Research Institute, Agricultural Research Center, 12619, Giza, Egypt.

Email

habebanna@yahoo.com

City

-

Orcid

0000-0002-3676-7516

First Name

Ismail

Last Name

Khatab

MiddleName

-

Affiliation

Genetics Dept., Fac. Agric., Kafer El-Sheikh Univ., Egypt

Email

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City

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Orcid

-

First Name

Rabie

Last Name

El-Shafey

MiddleName

-

Affiliation

Rice Res. Training Centre, Field Crops Res. Inst., ARC, Egypt

Email

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City

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Orcid

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Volume

44

Article Issue

1

Related Issue

13760

Issue Date

2016-06-01

Receive Date

2016-04-24

Publish Date

2016-06-30

Page Start

157

Page End

173

Print ISSN

1110-0230

Online ISSN

2090-2522

Link

https://ejp.journals.ekb.eg/article_92374.html

Detail API

https://ejp.journals.ekb.eg/service?article_code=92374

Order

12

Type

Original Article

Type Code

1,256

Publication Type

Journal

Publication Title

Egyptian Journal of Phytopathology

Publication Link

https://ejp.journals.ekb.eg/

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Article

Created At

22 Jan 2023