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84202

Detection of carbapenemase enzymes and genes among carbapenem-resistant Enterobacteriaceae isolates in Suez Canal University Hospitals in Ismailia ,Egypt.

Article

Last updated: 22 Jan 2023

Subjects

-

Tags

Medical bacteriology

Abstract

Background: Carbapenem antibiotics are important therapeutic agents in the health care setting, they are frequently used as an empiric therapy for life-threatening infections as well as infections with multi-drug-resistant gram-negative bacilli. Carbapenemase-producing Carbapenem-Resistant Enterobacteriaceae (CRE) are a significant public health challenge worldwide. The detection of carbapenemases productions in CRE strains is performed by phenotypic and genotypic methods. The phenotypic methods target carbapenemases production but provide no guidance regarding the specific carbapenemases types, while the genotypic diagnosis has the benefit of determining the exact mechanism conferring carbapenems resistance.
Aim: Improvement of the antibiotic policy and infection control strategies in Suez Canal University Hospitals in Ismailia; through adequate detection of carbapenem resistance in the hospitals.
Methods: All the CRE isolates were tested by the phenotypic methods (mCIM & eCIM) test to detect carbapenemases production, and screened by the conventional PCR for the presence of five carbapenemase genes, namely blaKPC, blaIMI, blaVIM, blaNDM, blaOXA-48
Results: The study showed that (53/155) 34.1% of the Enterobacteriaceae isolates were carbapenems resistant. Carbapenemases activity was detected in (36/53) 67.9% of the examined CRE isolates using mCIM test (20/36)37.8 % showed Metallo-carbapenemases and (16/36) 30.2% showed Serine- carbapenemases by eCIM test. 60.4% (32/53) were sensitive to colistin. While by PCR all the isolates (100%) harbor one or more carbapenemases genes. (51/53) 96.2% were proved to harbor blaOXA-48 gene, (47/53) 88.7% were proved to harbor blaNDM gene, (28/53) 52.8%, were proved to harbor blaVIM,gene, the percentage of blaIMI, blaKPC isolation was  (17/53) 32.1%, (4/53)7.5% respectively.
Conclusion: High frequencies of carbapenemase genes among CRE isolates.

DOI

10.21608/mid.2020.25702.1007

Keywords

CRE, carbapenems, PCR, mCIM

Authors

First Name

Atef

Last Name

Raheel

MiddleName

-

Affiliation

Microbiology and Immunology department, faculty of medicine, Suez Canal university, Egypt

Email

atefraheel@yahoo.com

City

-

Orcid

0000000246626629

First Name

Hasnaa

Last Name

Azab

MiddleName

-

Affiliation

Microbiology and Immunology department, faculty of medicine, Suez Canal university, Egypt

Email

hasnaa_azab@yahoo.com

City

-

Orcid

-

First Name

Waheed

Last Name

Hessam

MiddleName

-

Affiliation

Microbiology and Immunology department, faculty of medicine, Suez Canal university, Egypt

Email

w_hessam@hotmail.com

City

-

Orcid

-

First Name

Said

Last Name

Abbadi

MiddleName

-

Affiliation

microbiology department, faculty of medicine, Suez university, Egypt

Email

saidabbadi@hotmai.com

City

-

Orcid

-

First Name

Abeer

Last Name

Ezzat

MiddleName

-

Affiliation

Medical Microbiology and Immunology department, Director of IPC Suez Canal University Hospitals, Egypt

Email

dr.abeer.ezzat@gmail.com

City

-

Orcid

-

Volume

1

Article Issue

1

Related Issue

12038

Issue Date

2020-05-01

Receive Date

2020-03-07

Publish Date

2020-04-21

Page Start

24

Page End

33

Print ISSN

2682-4132

Online ISSN

2682-4140

Link

https://mid.journals.ekb.eg/article_84202.html

Detail API

https://mid.journals.ekb.eg/service?article_code=84202

Order

5

Type

Original Article

Type Code

1,157

Publication Type

Journal

Publication Title

Microbes and Infectious Diseases

Publication Link

https://mid.journals.ekb.eg/

MainTitle

-

Details

Type

Article

Created At

22 Jan 2023