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57466

Molecular Studies for Putative Promoter Activity in mdh sucCDAB Operon in Sinorhizobium meliloti

Article

Last updated: 22 Jan 2023

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Tags

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Abstract

The theoretical data on the malate dehydrogenase (mdh), succinyl-CoA synthetase (sucCDAB) operon in Sinorhizobium meliloti and the experimental data suggest that this operon is regulated from the promoter upstream of mdh gene. On the other hand, the untranslated intergenic region between the sucD and sucA genes is TA rich and could also contains active promoter site, as it was described previously in Bradyrhizobium japonicum. In this study the mdh upstream region and the intergenic region between sucD and sucA were analyzed, isolated and cloned in pOT1-green fluorescence protein (gfp)-fusion plasmid to examine the possibility of promoter activity. Sequences analyzed by promoter hunter program indicated that both regions have promoter sequences and transcription starting sites (TSS). In addition the measurement of the relative fluorescence units (RFU) indicated that the mdh upstream region contains a constitutive promoter which was active under all tested conditions. While the intergenic region between sucD and sucA also contain active promoter site, induced only by LBmc medium and M9 medium containing glutamate as sole carbon source. The overall results suggest that sucA expression is initiated from its own upstream promoter.

DOI

10.21608/rjab.2018.57466

Keywords

Sinorhizobium meliloti, promoter, sucCDAB operon, Green fluorescence protein, pOT1gfp

Authors

First Name

Rateb

Last Name

Abbas

MiddleName

Nabil

Affiliation

Department of Microbial Biotechnology, Genetic Engineering and Biotechnology Research Institute, University of Sadat City, Sadat City, Egypt.

Email

rateb.youssef@gebri.usc.edu.eg

City

-

Orcid

-

First Name

Noha

Last Name

Sorour

MiddleName

M.

Affiliation

Department of Industrial Biotechnology, Genetic Engineering and Biotechnology Research Institute, University of Sadat City, Sadat City, Egypt

Email

noha.sorour@gebri.usc.edu.eg

City

-

Orcid

-

Volume

4

Article Issue

1

Related Issue

8741

Issue Date

2018-06-01

Receive Date

2019-11-07

Publish Date

2018-06-01

Page Start

1

Page End

9

Print ISSN

2356-9433

Online ISSN

2682-3470

Link

https://rjab.journals.ekb.eg/article_57466.html

Detail API

https://rjab.journals.ekb.eg/service?article_code=57466

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1

Type

Original Article

Type Code

890

Publication Type

Journal

Publication Title

Research Journal of Applied Biotechnology

Publication Link

https://rjab.journals.ekb.eg/

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Details

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Article

Created At

22 Jan 2023