Although goat milk and their processing products were recommended for human consumption as a medicinal food, their strong goaty flavor limits their acceptability among the majority of consumers especially in Egypt. In this respect, Βeta-Cyclodextrin (β-CD) was reported to be effective in reducing the intensity of this flavor and as a result the commercial value of goat milk products was enhanced. In this research, the effect of reducing goat milk flavor in soft goat cheese by β-CD and their effect on texture and microstructure were investigated. The obtained results showed that the addition of β-CD at different concentrations (0.25g, 0.5 or 1.0% of milk) effectively trapped the short chain fatty acids and made goaty flavor un-sensed. The increase in moisture% and decreased in total solids% as a result of β-CD addition was also noticed. The addition of β-CD (0.25%) to goat milk cheese lead to an increase in firmness, cohesiveness, gumminess and chewiness and a decrease in springiness and resilience when compared to control. Electron micrographs of different goat cheese samples showed obvious microstructural changes in the protein network as affected by β-CD and these changes were Compatible with the changes in moisture and firmness.