210686

DNA Barcoding for Identification of Some Fish Species (Sparidae) in Mediterranean Sea Area

Article

Last updated: 03 Jan 2025

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Abstract

Background: DNA barcoding depend on a piece of the cytochrome C oxidase subunit I (COI) gene in the mitochondrial genome is broadly useful in species ID and biodiversity studies. The aim of this study is to create a complete barcoding reference database of some fishes in the Mediterranean Sea fall under the family Sparidae. . Materials and methods: Mitochondrial COI barcode sequences were demonstrated from 8 species of family Sparidae in the order Perciformes, the mean length of Mitochondrial COI sequences was 650 base pairs. Results: The results of the phylogenetic tree presented that monophyly of Sparidae species. The studied species displayed clades of conspecific sequences and showed a match between the present study and the GenBank (NCBI) database. All groups clustered with high bootstrap value, that showed next to each branch and the tree was rooted based on the out group of Rhincodon typus. Conclusion: We achieve that COI sequencing can be used to recognize different fish species, and also it is used to obtain high competence of species reorganization by DNA barcoding. We underline the power of DNA barcode and its tools to identify different species from Mediterranean Sea. Results give Species ID for each species under study by using DNA barcoding.

DOI

10.21608/jsrs.2021.210686

Keywords

DNA, Barcoding, Mediterranean, fish, Sparidae, PCR, COI

Authors

First Name

Shaimaa

Last Name

Eissa

MiddleName

Mohamed

Affiliation

Zoology, women collage, Ain shams universty

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eslam_eslam9768@yahoo.com

City

Cairo

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First Name

Yosur Gamal

Last Name

Fiteha

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-

Affiliation

Faculty of Women for Arts, Science and Education, Zoology Department, Ain Shams University, Cairo, Egypt.

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First Name

Hagar Tarek

Last Name

Elhifnawy

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-

Affiliation

Faculty of Agriculture, Genetics department, Ain Shams University, Cairo, Egypt.

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First Name

Mahmoud

Last Name

Magdy

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-

Affiliation

Faculty of Agriculture, Genetics department, Ain Shams University, Cairo, Egypt.

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Orcid

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First Name

Ahmed

Last Name

Mamoon

MiddleName

-

Affiliation

Faculty of Agriculture, Fish production department, Al Azhar University, Cairo, Egypt.

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First Name

Nadia

Last Name

Hussien

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-

Affiliation

Faculty of Women for Arts, Science and Education, Zoology Department, Ain Shams University, Cairo, Egypt.

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Orcid

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First Name

Mohamed Abdel-Salam

Last Name

Rashed

MiddleName

-

Affiliation

Faculty of Agriculture, Genetics department, Ain Shams University, Cairo, Egypt.

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Volume

38

Article Issue

part 2 (Biological Sciences)

Related Issue

20634

Issue Date

2021-01-01

Receive Date

2021-12-26

Publish Date

2021-01-01

Page Start

168

Page End

182

Print ISSN

2356-8364

Online ISSN

2356-8372

Link

https://jsrs.journals.ekb.eg/article_210686.html

Detail API

https://jsrs.journals.ekb.eg/service?article_code=210686

Order

8

Type

Original Article

Type Code

656

Publication Type

Journal

Publication Title

Journal of Scientific Research in Science

Publication Link

https://jsrs.journals.ekb.eg/

MainTitle

DNA Barcoding for Identification of Some Fish Species (Sparidae) in Mediterranean Sea Area

Details

Type

Article

Created At

22 Jan 2023