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51700

Phylogenetic Analysis of Infectious Bronchitis Viruses Currently Circulating in the Egyptian Field

Article

Last updated: 03 Jan 2025

Subjects

-

Tags

Clinical Science, Surgery and Veterinary Diseases (Pathology, Clinical…ltry Diseases, Fish Diseases and Management, Surgery, Theriogenology)

Abstract

One of the major problems of infectious bronchitis virus (IBV) is the frequent emergence of new variants in the Egyptian field. In the present study, 42 broiler chicken flocks suffered from respiratory troubles were investigated for infectious bronchitis virus in 10 Governorates in Egypt during 2016-2018. Ten out of 42 examined flocks revealed variable degrees of embryo lesions after 3-5 passages with negative heamagglutination (HA) activity. From these 10 flocks, IBV was confirmed in six flocks using reverse transcriptase polymerase chain reaction (RT-PCR) assay. Four IBV-positive isolates were selected for further sequence analysis. Partial sequencing of S1 gene revealed four IBV variant-2 isolates circulating among chickens in Egypt. These isolates are IB-Beh-Ch-F2-2016, IB-Sh-Ch-F25-2017, IB-Sh-Ch-F41-2018 and IB-Sh-Ch-F42-2018 and submitted on Gen Bank with accession numbers MH460643, MH460644, MK408615 and MK408616, respectively.  The IB-Sh-Ch-F25-2017 isolate had only one amino acid substitution while IB-Beh-Ch-F2-2016, IB-Sh-Ch-F41-2018 and IB-Sh-Ch-F42-2018 isolates had much higher genetic diversity. The similarity between classic viruses of vaccine origin used in Egypt (H120, Ma5) and our four filed isolates ranged between 75.7 and 80.4%. It could be concluded that IB variant-2 strains still circulate in the Egyptian field in spite of vaccination. Therefore we need to revise the IBV vaccines used in Egypt and try to prepare local vaccines with periodic evaluation of cross protection of such vaccines. 

DOI

10.21608/zvjz.2019.16318.1075

Keywords

IBV- Variant 2, RT-PCR, Broilers, Genetic diversity, Egypt

Authors

First Name

Ibrahim

Last Name

Ghanem

MiddleName

-

Affiliation

Avian and Rabbit Medicine Department, Faculty of Veterinary Medicine, Zagazig University, Zagazig, 44519, Egypt

Email

ibrahimghanem2025@gmail.com

City

-

Orcid

-

First Name

Naglaa

Last Name

Awad

MiddleName

-

Affiliation

Avian and Rabbit Medicine Department, Faculty of Veterinary Medicine, Zagazig University, Zagazig, 44519, Egypt

Email

nf2731982@gmail.com

City

-

Orcid

-

First Name

Ashraf

Last Name

Hussein

MiddleName

-

Affiliation

Avian and Rabbit Medicine Department, Faculty of Veterinary Medicine, Zagazig University, Zagazig, 44519, Egypt

Email

ashrafhamed1@yahoo.com

City

-

Orcid

-

First Name

Ahmed

Last Name

Lelwa

MiddleName

-

Affiliation

Directorate of Veterinary Medicine, Sharkia - General Organization for Veterinary Services, Egypt

Email

dr_ahmed9112019@yahoo.com

City

-

Orcid

-

Volume

47

Article Issue

3

Related Issue

7930

Issue Date

2019-09-01

Receive Date

2019-08-27

Publish Date

2019-09-01

Page Start

330

Page End

339

Print ISSN

1110-1458

Online ISSN

2357-075X

Link

https://zvjz.journals.ekb.eg/article_51700.html

Detail API

https://zvjz.journals.ekb.eg/service?article_code=51700

Order

10

Type

Original Article

Type Code

601

Publication Type

Journal

Publication Title

Zagazig Veterinary Journal

Publication Link

https://zvjz.journals.ekb.eg/

MainTitle

Phylogenetic Analysis of Infectious Bronchitis Viruses Currently Circulating in the Egyptian Field

Details

Type

Article

Created At

22 Jan 2023