211799

IRAP-PCR Technique for Determining the Biodiversity between Egyptian Barley Cultivars

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Last updated: 01 Jan 2025

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Abstract

THE GENETIC diversity of some Egyptian barley cultivars was assessed using twelve primers from the inter-retrotransposons amplified polymorphism (IRAP) marker system. In addition, moisture content, crude, lipids, ash, and crude fiber contents were measured in the studied cultivars. The obtained results showed that the average protein content was 11.19%, and the highest one was recorded for Giza135 cultivar with an average value of 12.3% to a lesser extent in Giza 129 (8.7%). Sixty-three IRAP bands, scores of 33.3% and 66.7% of monomorphic and polymorphic bands were recorded, respectively. The polymorphism heterozygosity index values IRAP marker traits were ranged as H (0.04-–0.47), PIC (0.04–0.36), E (7.50–11.75) HAV (0.00–0.01), MI (0.04–0.07), D (0.04–0.61), and R (0.5.–6.86). The proportion of appearing polymorphism was 63%. This multiplicity was used to measure the difference between the studied cultivars; however, there were no unique bands in all cultivars for each IRAP primer. There was a similarity between the PCA, heat map, and dendrogram distributions of Giza123, Giza124, Giza125, and Giza126. The Bioplot analysis divided the cultivars into four groups. The data revealed a significant difference, among the surveyed varieties of barley cultivars in Egypt, at the molecular level.

DOI

10.21608/ejbo.2021.93071.1768

Keywords

Barley cultivars, biodiversity, dendrogram, IRAP-PCR

Authors

First Name

Ehab M.

Last Name

Zayed

MiddleName

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Affiliation

Genetic Resources Research Department Field Crops Research Institute, Agricultural Research Center, Giza-12619, Egypt , Cell Study Research Department, Field Crops Research Institute, Agricultural Research Center, Giza-12619, Egypt

Email

ehabzayed977@gmail.com

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Orcid

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First Name

Marwa M.

Last Name

Ghonaim

MiddleName

-

Affiliation

Cell Study Research Department, Field Crops Research Institute, Agricultural Research Center, Giza-12619, Egypt

Email

marwa_ghonaim2006@yahoo.com

City

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Orcid

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First Name

Ahmed M.

Last Name

Attya

MiddleName

-

Affiliation

Barley Research Department, Field Crops Research Institute, Agricultural Research Center, Giza-12619, Egypt

Email

ahmed_1099@hotmail.com

City

-

Orcid

-

First Name

Nahid A.

Last Name

Morsi

MiddleName

-

Affiliation

Cell Study Research Department, Field Crops Research Institute, Agricultural Research Center, Giza-12619, Egypt

Email

nahidaa66@yahoo.com

City

-

Orcid

-

First Name

Khalid A.

Last Name

Hussein

MiddleName

-

Affiliation

Botany & Microbiology Department, Faculty of Science, Assiut University, 71516, Assiut, Egypt

Email

khussein@aun.edu.eg

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-

Orcid

-

Volume

62

Article Issue

2

Related Issue

33732

Issue Date

2022-05-01

Receive Date

2021-08-28

Publish Date

2022-05-01

Page Start

359

Page End

370

Print ISSN

0375-9237

Online ISSN

2357-0350

Link

https://ejbo.journals.ekb.eg/article_211799.html

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https://ejbo.journals.ekb.eg/service?article_code=211799

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Original Article

Type Code

111

Publication Type

Journal

Publication Title

Egyptian Journal of Botany

Publication Link

https://ejbo.journals.ekb.eg/

MainTitle

IRAP-PCR Technique for Determining the Biodiversity between Egyptian Barley Cultivars

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Type

Article

Created At

22 Jan 2023