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190190

Barcoding of Some Plant Species Using the <i>rbcL</i> Gene in the Mediterranean Oolitic Sand Dunes West of Alexandria, Egypt

Article

Last updated: 01 Jan 2025

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Abstract

IN the Mediterranean Basin, oolitic sand dunes extend along the northeastern coast of Africa between the Gulf of Gabes (Tunisia) and the Nile Delta (Egypt), attenuating coastal vulnerability to storms and saltwater intrusion and protecting inland infrastructure. Psammophytes are typical and distinctive plants for dune habitats; they are the primary drivers for dune growth and stabilization by trapping sand particles in their shoot and root systems. The Anthropocene fingerprint may create an environment favorable for nonpsammophyte invasion and subsequent alteration in sand dune habitat structure and functions. The authentication of sand dune-inhabiting species should be a priority for conservation or restoration measures concerning sand dune habitats. This study is the first rbcL-based DNA barcoding documentation of 20 plant species inhabiting the vulnerable Egyptian oolitic sand dune habitats in Burg El Arab area, west of Alexandria. Results highlighted the applicability of the rbcL locus sequence for species authentication and recognition of the examined plant taxa sharing the same habitat. The phylogenetic analysis of rbcL barcode polymorphism revealed current taxonomic relationships among the assigned species. Results added valuable information to the authentication of sand dune plants, providing the first rbcL barcodes for species growing in oolitic sand dune habitats in Egypt, six of which were submitted for the first time to GenBank.

DOI

10.21608/ejbo.2021.74134.1683

Keywords

Burg El-Arab, DNA-Barcoding, Egypt, <i>rbcL</i>, Oolitic sands dunes, Psammophytes

Authors

First Name

Ahmed S.

Last Name

Fouad

MiddleName

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Affiliation

Botany and Microbiology Department, Faculty of Science, Cairo University, 12613 Cairo, Egypt

Email

ahmedsfouad@yahoo.com

City

Cairo

Orcid

-

First Name

Azza B.

Last Name

Hamed

MiddleName

-

Affiliation

Botany and Microbiology Department, Faculty of Science, Cairo University, 12613 Cairo, Egypt

Email

azzabadr@sci.cu.edu.eg

City

-

Orcid

-

First Name

Wafaa M.

Last Name

Amer

MiddleName

-

Affiliation

Botany and Microbiology Department, Faculty of Science, Cairo University, 12613 Cairo, Egypt

Email

wafaa_amer@hotmail.com

City

-

Orcid

-

First Name

Rehab M.

Last Name

Hafez

MiddleName

-

Affiliation

Botany and Microbiology Department, Faculty of Science, Cairo University, 12613 Cairo, Egypt

Email

rehabhafez@sci.cu.edu.eg

City

Giza

Orcid

0000-0003-0528-288X

Volume

62

Article Issue

1

Related Issue

29753

Issue Date

2022-01-01

Receive Date

2021-04-26

Publish Date

2022-01-01

Page Start

159

Page End

168

Print ISSN

0375-9237

Online ISSN

2357-0350

Link

https://ejbo.journals.ekb.eg/article_190190.html

Detail API

https://ejbo.journals.ekb.eg/service?article_code=190190

Order

13

Type

Original Article

Type Code

111

Publication Type

Journal

Publication Title

Egyptian Journal of Botany

Publication Link

https://ejbo.journals.ekb.eg/

MainTitle

Barcoding of Some Plant Species Using the <i>rbcL</i> Gene in the Mediterranean Oolitic Sand Dunes West of Alexandria, Egypt

Details

Type

Article

Created At

22 Jan 2023