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138554

Phylogenetic And Genetic Diversity Of Some Carangid Species From The Egyptian Red Sea Using Divergent Domain D11 Of 28S rRNA Gene

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Last updated: 01 Jan 2025

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Abstract

A study of molecular diversity and phylogenetic analysis of eight Carangid species, which are ecologically and economically important species, was carried out using Divergent Domain D11 of 28S rRNA Gene. The size of the consensus sequences of Divergent Domain D11 of 28S rRNA Gene ranged from 490 in Carangoides bajad, to 496 in Carangoides malabaricus. The average content of A+T was lower than C+G. The average content of C+G slightly changing among the eight fishes, it was  55.3% in  Carangoides bajad; 55.7%  in Carangoides chrysophrys; 55.5% in Carangoides malabaricus; 55.6% in Caranx melampygus; 55.3% in Caranx sexfasciatus; 55.6% in Elagatis bipinnulata; 55.5% in Scomberoides lysan and 55.9% in Trachinotus ovatus. Genetic distance among Carangid species ranged from 0.000% to 0.005%. Overall the distance value among all fishes was 0.005%. The phylogenetic relations among our species were inferred by three methods, the Maximum Likelihood, Neighbor-Joining, and Minimum Evolution. The three different phylogenetic approaches resulted mostly in similar tree topologies and the clades. Results of Divergent Domain D11 of 28S rRNA revealed the species belong to two genera Carangoides and Caranx were genetically related to each other more than the rest genera; Elagatis, Scomberoides, and Trachinotus. This investigation could be utilized for genetic relationship and association analyses in the taxonomy studies of Carangid fishes.

DOI

10.21608/ejabf.2021.138554

Authors

First Name

Mohammad

Last Name

Allam

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Email

mohammad_allam10@sci.svu.edu.eg

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Orcid

0000-0001-8639-196X

First Name

Zeinab

Last Name

A. Mar'ie

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-

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Orcid

-

Volume

25

Article Issue

1

Related Issue

20326

Issue Date

2021-01-01

Receive Date

2021-01-11

Publish Date

2021-01-01

Page Start

61

Page End

73

Print ISSN

1110-6131

Online ISSN

2536-9814

Link

https://ejabf.journals.ekb.eg/article_138554.html

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https://ejabf.journals.ekb.eg/service?article_code=138554

Order

4

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Original Article

Type Code

103

Publication Type

Journal

Publication Title

Egyptian Journal of Aquatic Biology and Fisheries

Publication Link

https://ejabf.journals.ekb.eg/

MainTitle

Phylogenetic And Genetic Diversity Of Some Carangid Species From The Egyptian Red Sea Using Divergent Domain D11 Of 28S rRNA Gene

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Article

Created At

22 Jan 2023