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Comparison of Three Phenotypic Methods and PCR for Rapid Detection of Carbapenemase ‎Production in Klebsiella spp. and Acinetobacter spp.

Article

Last updated: 22 Jan 2023

Subjects

-

Tags

Infectious diseases

Abstract

Background and study aim: The last decade was marked by the emergence and spread of carbapenemases. The study aims to ‎compare three phenotypic methods with PCR for rapid detection of carbapenemase in carbapenem ‎resistant gram negative bacteria.
Material and Methods: This study was conducted on 50 carbapenem-resistant gram negative bacteria. clinical isolates in Central ‎Microbiology Laboratory, Ain Shams University Hospitals. All isolates were tested for ‎carbapenemase encoding genes (blaKPC, blaIMP, blaOXA-48, blaVIM and blaGES) using PCR.  ‎Phenotypic detection of carbapenemases was made by chromID® CARBA SMART Agar ‎‎(CARB/OXA), Modified Hodge test and Blue-Carba test‎‎‎.‎
Results: The 50 isolates included Klebsiella spp. (28/50, 56%) and Acinetobacter spp. (22/50, 44%). All Klebsiella isolates were positive for one or more genes coding for carbapenemase by PCR, with predominance of blaOXA-48 gene, while 20/22 (90.9%) of Acinetobacter isolates were positive for one or more genes coding for carbapenemase by PCR with predominance of blaOXA-48 gene. Chromogenic media gave positive results in 98% (49/50) of isolates with sensitivity 100% and specificity 0% for detection of carbapenemase producers. MHT gave positive results in 45 isolates out of 48 PCR positive isolates with a sensitivity of 93.8% and specificity 0% for detection of carbapenemase production. Blue carba test gave positive results in 48 isolates out of 48 PCR positive isolates with a sensitivity of 100% and specificity 100% for detection of carbapenemase production‎‎‎‎‎‎‎.
Conclusion: Blue carba test agreed with PCR with a sensitivity of 100% and specificity 100%, However it failed to detect ‎the carbapenemases detected by other phenotypic tests‎ ‎ ‎‎‎‎‎‎‎‎.

DOI

10.21608/aeji.2022.135364.1219

Keywords

Key words: carbapenem resistant, chromogenic media, Modified hodge test, blue carba

Authors

First Name

Omnia

Last Name

Taher

MiddleName

MA

Affiliation

Department of Clinical Pathology, Faculty of Medicine, Ain Shams University, Abbassia, ‎Cairo11566, Egypt.

Email

omniamohamed@med.asu.edu.eg

City

Cairo

Orcid

0000-0001-7060-6196

Volume

12

Article Issue

3

Related Issue

36292

Issue Date

2022-09-01

Receive Date

2022-04-22

Publish Date

2022-09-01

Page Start

236

Page End

244

Print ISSN

2090-7613

Online ISSN

2090-7184

Link

https://aeji.journals.ekb.eg/article_253717.html

Detail API

https://aeji.journals.ekb.eg/service?article_code=253717

Order

6

Type

Original Article

Type Code

616

Publication Type

Journal

Publication Title

Afro-Egyptian Journal of Infectious and Endemic Diseases

Publication Link

https://aeji.journals.ekb.eg/

MainTitle

-

Details

Type

Article

Created At

22 Jan 2023