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23898

A SCALABLE PARALLEL ALGORITHM FOR TURNPIKE PROBLEM

Article

Last updated: 03 Jan 2025

Subjects

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Tags

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Abstract

Given a set of all pairwise distances between points on a line. The Turnpike problem is to reconstruct the positions of those
points. We reduce the running time to generate a set of solution for the turnpike problem by designing a parallel algorithm on a
multicore system in case of the worst case. The algorithm is based on dividing the original problem into many independent subproblems
of balanced size. The experimental study shows that our parallel algorithm significantly reduces the running time of
the best practical sequential algorithm. Also, the scalability of the proposed algorithm is linear. Finally, we apply the proposed
algorithm on restriction site mapping of DNA.

DOI

10.21608/JOEMS.2018.9458

Keywords

turnpike, exact algorithm, parallel algorithm, Multicore

Authors

First Name

Hazem

Last Name

Bahig

MiddleName

-

Affiliation

Computer Science Division, Department of Mathematics, Faculty of Science, Ain Shams University, & Computer Science and Software Engineering Department, College of Computer Science and

Email

hbahig@sci.asu.edu.eg

City

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Orcid

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First Name

Mostafa

Last Name

Abbas

MiddleName

-

Affiliation

Qatar Computing Research Institute, Hamad Bin Khalifa University, Doha, Qatar.

Email

-

City

-

Orcid

-

Volume

26

Article Issue

1

Related Issue

4436

Issue Date

2018-01-01

Receive Date

2017-01-07

Publish Date

2018-01-01

Page Start

18

Page End

26

Print ISSN

1110-256X

Online ISSN

2090-9128

Link

https://joems.journals.ekb.eg/article_23898.html

Detail API

https://joems.journals.ekb.eg/service?article_code=23898

Order

2

Type

Original Article

Type Code

485

Publication Type

Journal

Publication Title

Journal of the Egyptian Mathematical Society

Publication Link

https://joems.journals.ekb.eg/

MainTitle

A SCALABLE PARALLEL ALGORITHM FOR TURNPIKE PROBLEM

Details

Type

Article

Created At

22 Jan 2023